Here is a forwarded message from Mike Koss about install problems. For Apple 10.8, and Xcode versions ~3-4, we have been recommending using Apple gcc 4.2 with a suitable gfortran. I've been using gfortran 4.7 from sourceforge. Anyone out there have luck with g95? Since Apple 10.9, Mavericks, and Xcode ~>5, Apple switched out their gcc, and some folks out there have been having trouble with this gcc when building MARX, and have had to revert back to sourceforge gcc. However, none of us under those circumstances have yet to try HEASOFT+ISIS. So, if anyone has further comments on the below, much appreciated. -Mike From: Michael Koss <mike.koss_at_email.domain.hiddenSubject: Trouble installing Date: Thu, 19 Jun 2014 12:09:37 +0200 I can't seem to get isis to compile. I installed heasoft from source = (XSPEC version: 12.8.1g) and I am trying to use the same fortran = compiler I used to compile heasoft. Attached is the error and the log. = As per usual it has something to do with the Fortran compiler. I am = running OS 10.8. Thanks, Mike Koss %%%%%%%%%%%%% filename=config.log This file contains any messages produced by compilers while running configure, to aid debugging if configure makes a mistake. It was created by configure, which was generated by GNU Autoconf 2.69. Invocation command line was $ ./configure --prefix=/Users/mkoss/Documents/software/isis/ --with-slang=/Users/mkoss/Documents/software/isis/ --with-headas=/Users/mkoss/Documents/software/heasoft-6.15/i386-apple-darwin12.5.0 ## --------- ## ## Platform. ## ## --------- ## hostname = public-docking-hpx-1947.ethz.ch uname -m = x86_64 uname -r = 12.5.0 uname -s = Darwin uname -v = Darwin Kernel Version 12.5.0: Sun Sep 29 13:33:47 PDT 2013; root:xnu-2050.48.12~1/RELEASE_X86_64 /usr/bin/uname -p = i386 /bin/uname -X = unknown /bin/arch = unknown /usr/bin/arch -k = unknown /usr/convex/getsysinfo = unknown /usr/bin/hostinfo = Mach kernel version: Darwin Kernel Version 12.5.0: Sun Sep 29 13:33:47 PDT 2013; root:xnu-2050.48.12~1/RELEASE_X86_64 Kernel configured for up to 8 processors. 4 processors are physically available. 8 processors are logically available. Processor type: i486 (Intel 80486) Processors active: 0 1 2 3 4 5 6 7 Primary memory available: 16.00 gigabytes Default processor set: 191 tasks, 911 threads, 8 processors Load average: 1.40, Mach factor: 6.59 /bin/machine = unknown /usr/bin/oslevel = unknown /bin/universe = unknown PATH: /Users/mkoss/Documents/software/heasoft-6.15/i386-apple-darwin12.5.0/bin PATH: /Applications/itt/idladds/kcorrect/bin PATH: /Users/mkoss/Documents/software/g95-install/bin/ PATH: /bin PATH: /usr/sbin PATH: /usr/bin PATH: /sbin PATH: /usr/local/bin PATH: /opt/local/bin PATH: /sw/bin PATH: /usr/X11R6/bin PATH: /Applications/itt/idl71/bin PATH: /Volumes/Apps_and_Docs/mkoss/bin/bibtexformat PATH: /opt/local/bin PATH: /opt/local/sbin/ PATH: /Users/mkoss PATH: /Users/mkoss/Documents/software/Montage_v3.3/bin ## ----------- ## ## Core tests. ## ## ----------- ## configure:2695: checking whether make sets $(MAKE) configure:2717: result: yes configure:2769: checking for ranlib configure:2785: found /usr/bin/ranlib configure:2796: result: ranlib configure:2832: checking for a BSD-compatible install configure:2900: result: /usr/bin/install -c configure:2915: checking build system type configure:2929: result: i386-apple-darwin12.5.0 configure:2949: checking host system type configure:2962: result: i386-apple-darwin12.5.0 configure:3089: checking for Fortran compiler version configure:3098: /Users/mkoss/Documents/software/g95-install/bin/i686-apple-darwin10.3.0-g95 -m32 --version >&5 G95 (GCC 4.1.2 (g95 0.94!) Jan 17 2013) Copyright (C) 2002-2008 Free Software Foundation, Inc. G95 comes with NO WARRANTY, to the extent permitted by law. You may redistribute copies of G95 under the terms of the GNU General Public License. For more information about these matters, see the file named COPYING configure:3109: $? = 0 configure:3098: /Users/mkoss/Documents/software/g95-install/bin/i686-apple-darwin10.3.0-g95 -m32 -v >&5 Using built-in specs. Target: Configured with: ../configure --enable-languages=c --disable-nls Thread model: posix gcc version 4.1.2 (g95 0.94!) Jan 17 2013 configure:3109: $? = 0 configure:3098: /Users/mkoss/Documents/software/g95-install/bin/i686-apple-darwin10.3.0-g95 -m32 -V >&5 i686-apple-darwin10.3.0-g95: argument to `-V' missing configure:3109: $? = 1 configure:3098: /Users/mkoss/Documents/software/g95-install/bin/i686-apple-darwin10.3.0-g95 -m32 -qversion >&5 i686-apple-darwin10.3.0-g95: unrecognized option '-qversion' i686-apple-darwin10.3.0-g95: no input files configure:3109: $? = 1 configure:3124: checking whether the Fortran compiler works configure:3146: /Users/mkoss/Documents/software/g95-install/bin/i686-apple-darwin10.3.0-g95 -m32 conftest.f >&5 ld: warning: -macosx_version_min not specified, assuming 10.8 ld: warning: PIE disabled. Absolute addressing (perhaps -mdynamic-no-pic) not allowed in code signed PIE, but used in __start from /usr/lib//crt1.o. To fix this warning, don't compile with -mdynamic-no-pic or link with -Wl,-no_pie configure:3150: $? = 0 configure:3198: result: yes configure:3201: checking for Fortran compiler default output file name configure:3203: result: a.out configure:3209: checking for suffix of executables configure:3216: /Users/mkoss/Documents/software/g95-install/bin/i686-apple-darwin10.3.0-g95 -m32 -o conftest conftest.f >&5 ld: warning: -macosx_version_min not specified, assuming 10.8 ld: warning: PIE disabled. Absolute addressing (perhaps -mdynamic-no-pic) not allowed in code signed PIE, but used in __start from /usr/lib//crt1.o. To fix this warning, don't compile with -mdynamic-no-pic or link with -Wl,-no_pie configure:3220: $? = 0 configure:3242: result: configure:3258: checking whether we are cross compiling configure:3266: /Users/mkoss/Documents/software/g95-install/bin/i686-apple-darwin10.3.0-g95 -m32 -o conftest conftest.f >&5 ld: warning: -macosx_version_min not specified, assuming 10.8 ld: warning: PIE disabled. Absolute addressing (perhaps -mdynamic-no-pic) not allowed in code signed PIE, but used in __start from /usr/lib//crt1.o. To fix this warning, don't compile with -mdynamic-no-pic or link with -Wl,-no_pie configure:3270: $? = 0 configure:3277: ./conftest dyld: no valid entry point ./configure: line 3279: 81324 Trace/BPT trap: 5 ./conftest$ac_cv_exeext configure:3281: $? = 133 configure:3288: error: in `/Users/mkoss/Documents/software/isis/isis-1.6.2-27': configure:3290: error: cannot run Fortran compiled programs. If you meant to cross compile, use `--host'. See `config.log' for more details ## ---------------- ## ## Cache variables. ## ## ---------------- ## ac_cv_build=i386-apple-darwin12.5.0 ac_cv_env_CC_set=set ac_cv_env_CC_value='/usr/bin/gcc -m32' ac_cv_env_CFLAGS_set= ac_cv_env_CFLAGS_value= ac_cv_env_CPPFLAGS_set= ac_cv_env_CPPFLAGS_value= ac_cv_env_CPP_set= ac_cv_env_CPP_value= ac_cv_env_FCFLAGS_set= ac_cv_env_FCFLAGS_value= ac_cv_env_FC_set=set ac_cv_env_FC_value='/Users/mkoss/Documents/software/g95-install/bin/i686-apple-darwin10.3.0-g95 -m32' ac_cv_env_LDFLAGS_set= ac_cv_env_LDFLAGS_value= ac_cv_env_LIBS_set= ac_cv_env_LIBS_value= ac_cv_env_XMKMF_set= ac_cv_env_XMKMF_value= ac_cv_env_build_alias_set= ac_cv_env_build_alias_value= ac_cv_env_host_alias_set= ac_cv_env_host_alias_value= ac_cv_env_target_alias_set= ac_cv_env_target_alias_value= ac_cv_host=i386-apple-darwin12.5.0 ac_cv_path_install='/usr/bin/install -c' ac_cv_prog_ac_ct_RANLIB=ranlib ac_cv_prog_make_make_set=yes ## ----------------- ## ## Output variables. ## ## ----------------- ## ATOMDB_DIR='' BUILD_ISIS_EXTRAS='' CC='/usr/bin/gcc -m32' CCFITS_INC='' CCFITS_INC_DIR='' CCFITS_LIB='' CCFITS_LIB_DIR='' CC_SHARED='' CFITSIO_INC='' CFITSIO_INC_DIR='' CFITSIO_LIB='' CFITSIO_LIBDIR='' CFITSIO_LIBNAME='' CFITSIO_LIB_DIR='' CFITSIO_LIB_FOR_MODULES='' CFLAGS='' CONFIG_DIR='/Users/mkoss/Documents/software/isis/isis-1.6.2-27' CONFIG_DIR_SANS_AMD='/Users/mkoss/Documents/software/isis/isis-1.6.2-27' CPP='' CPPFLAGS='' DEFS='' DYNAMIC_LINK_FLAGS='' DYNAMIC_LINK_LIB='' ECHO_C='\c' ECHO_N='' ECHO_T='' EGREP='' ELFDIR='' ELF_CC='' ELF_CFLAGS='' ELF_DEP_LIBS='' ELF_FC_FCFLAGS='' ELF_LINK='' ELF_LINK_CMD='' EXEEXT='' EXTRA_INC='' EXTRA_LIB='' FC='/Users/mkoss/Documents/software/g95-install/bin/i686-apple-darwin10.3.0-g95 -m32' FCFLAGS='' FCLIBS='' FC_EXTRA_LIBS='' FC_MANGLE_SUFFIX='' FC_MANGLE_UPCASE='' FC_SHARED='' GREP='' HEADAS_DIR='' HEADAS_LIBDIR='' INSTALL_DATA='${INSTALL} -m 644' INSTALL_MODULE='' INSTALL_PROGRAM='${INSTALL}' INSTALL_SCRIPT='${INSTALL}' ISIS_LIB_FOR_MODULES='' LDFLAGS='' LD_FLAGS_FOR_XSPEC='' LIBOBJS='' LIBS='' LINK_XSPEC_STATIC='' LTLIBOBJS='' MODULE_INSTALL_DIR='' MODULE_LIST='' OBJDIR='' OBJEXT='' OTHER_PGPLOT_LIBS='' PACKAGE_BUGREPORT='' PACKAGE_NAME='' PACKAGE_STRING='' PACKAGE_TARNAME='' PACKAGE_URL='' PACKAGE_VERSION='' PATH_SEPARATOR=':' PGPLOT_INC='' PGPLOT_INC_DIR='' PGPLOT_LIB='' PGPLOT_LIBDIR='' PGPLOT_LIB_DIR='' PROGRAM_ELFOBJECTS_src='' PROGRAM_ETCFILES='' PROGRAM_FC_ELFOBJECTS_src='' PROGRAM_FC_OBJECTS_src='' PROGRAM_FC_OFILES_src='' PROGRAM_OBJECTS_src='' PROGRAM_OFILES_src='' PROGRAM_SHAREFILES='' RANLIB='ranlib' READLINE_DIR='' READLINE_INC='' READLINE_LIB='' RPATH='' SET_MAKE='' SHELL='/bin/sh' SITE_LOCAL_SETUP='' SLANG_DLL_CFLAGS='' SLANG_INC='' SLANG_INC_DIR='' SLANG_LIB='' SLANG_LIBDIR='' SLANG_LIB_DIR='' SLANG_LIB_FOR_MODULES='' SL_FILES_INSTALL_DIR='' SRCDIR='' SYS_EXTRA_LIBS='' XMKMF='' XSPEC_MODELSONLY='' XSPEC_MODULE_LIBS='' X_CFLAGS='' X_EXTRA_LIBS='' X_LIBS='' X_PRE_LIBS='' ac_ct_CC='' ac_ct_FC='' bindir='${exec_prefix}/bin' build='i386-apple-darwin12.5.0' build_alias='' build_cpu='i386' build_os='darwin12.5.0' build_vendor='apple' datadir='${datarootdir}' datarootdir='${prefix}/share' docdir='${datarootdir}/doc/${PACKAGE}' dvidir='${docdir}' exec_prefix='NONE' host='i386-apple-darwin12.5.0' host_alias='' host_cpu='i386' host_os='darwin12.5.0' host_vendor='apple' htmldir='${docdir}' includedir='${prefix}/include' infodir='${datarootdir}/info' libdir='${exec_prefix}/lib' libexecdir='${exec_prefix}/libexec' localedir='${datarootdir}/locale' localstatedir='${prefix}/var' mandir='${datarootdir}/man' oldincludedir='/usr/include' pdfdir='${docdir}' prefix='/Users/mkoss/Documents/software/isis/isis/1.6.2' prefix_input='/Users/mkoss/Documents/software/isis' program_transform_name='s,x,x,' psdir='${docdir}' sbindir='${exec_prefix}/sbin' sharedstatedir='${prefix}/com' subdir='1.6.2' sysconfdir='${prefix}/etc' target_alias='' termcap_lib='' with_xspec_version='' ## ----------- ## ## confdefs.h. ## ## ----------- ## /* confdefs.h */ #define PACKAGE_NAME "" #define PACKAGE_TARNAME "" #define PACKAGE_VERSION "" #define PACKAGE_STRING "" #define PACKAGE_BUGREPORT "" #define PACKAGE_URL "" configure: exit 1 ---- You received this message because you are subscribed to the isis-users list. To unsubscribe, send a message to isis-users-request_at_email.domain.hiddenwith the first line of the message as: unsubscribeReceived on Thu Jun 19 2014 - 07:18:56 EDT
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